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hepatocellular_carcinoma [2018/10/18 13:22] – [Objectives] adminhepatocellular_carcinoma [2019/05/20 04:16] – [Project 1:] admin
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 ==== Project 1: ==== ==== Project 1: ====
  
-  - Uploading RNAseq data to Maverick: Jessica's lab [[jessicas_lab_notebook|notebook]], 2015/12/15. +  - Uploading RNAseq data to Maverick: Jessica's lab [[:jessicas_lab_notebook|notebook]], 2015/12/15. 
-  - Mapping reads and de analysis: [[habils_lab_notebook|Habil's lab notebook]], 2015/12/16. +  - Mapping reads and de analysis: [[:habils_lab_notebook|Habil's lab notebook]], 2015/12/16. 
-  - Mapping gene names: [[amirs_labnotebook_2|Amir's]] lab notebook, 1/10/2016.+  - Mapping gene names: [[:amirs_labnotebook_2|Amir's]] lab notebook, 1/10/2016.
   - Computing eigengen: Habil's lab notebook, 2016/01/27   - Computing eigengen: Habil's lab notebook, 2016/01/27
   - Comparing de genes with human databases: Jessica's lab notebook, 2016/2/4.   - Comparing de genes with human databases: Jessica's lab notebook, 2016/2/4.
   - The comparison of Will's DE analysis and ours: Jessica's lab notebook, 2016/2/4.   - The comparison of Will's DE analysis and ours: Jessica's lab notebook, 2016/2/4.
   - PCA: Jessica's lab notebook, 2016/5/31.   - PCA: Jessica's lab notebook, 2016/5/31.
 +  - Habil inferred the eigengene in TCGA data on [[http://oncinfo.org/habils_lab_notebook#section20190514|2019/05/14]].
 +
  
 ==== Publication: ==== ==== Publication: ====
-Jessica Zavadil, Maryanne Herzig, Kim Hildreth, Amir Foroushani, William Boswell, Ronald Walter, Robert Reddick, Hugh White, Habil Zare. C3HeB/FeJ Mice Mimic Gene Expression and Pathobiological Features of Human Hepatocellular Carcinoma,  //Molecular Carcinogenesis//, Under review.+Jessica Zavadil, Maryanne Herzig, Kim Hildreth, Amir Foroushani, William Boswell, Ronald Walter, Robert Reddick, Hugh White, Habil Zare. C3HeB/FeJ Mice Mimic Gene Expression and Pathobiological Features of Human Hepatocellular Carcinoma,  //Molecular Carcinogenesis//, In press.
 {{:wiki:public:jessica_compare.png?direct&400|}} {{:wiki:public:jessica_compare.png?direct&400|}}
 ==== Project 2: ==== ==== Project 2: ====