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clonal_decomposition [2018/10/19 21:39]
admin [Publications]
clonal_decomposition [2021/09/12 07:29] (current)
admin [Software]
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 ===== Software ===== ===== Software =====
-[[http://​www.bioconductor.org/​packages/​devel/​bioc/​html/​Clomial.html|Clomial]] is an R package for fitting binomial distributions data obtained from Next Gen. Sequencing of multiple samples from the same tumor. The trained parameters can be interpreted to infer the clonal structure of the tumor. The package includes the data from the breast tumor that we analyzed in the corresponding publication.\\ \\  + 
- ​Slides[{{ :​clomial.pptx|ppt}}] ​ +[[http://​www.bioconductor.org/​packages/​devel/​bioc/​html/​Clomial.html|Clomial]] is an R package for fitting binomial distributions data obtained from Next Gen. Sequencing of multiple samples from the same tumor. The trained parameters can be interpreted to infer the clonal structure of the tumor. The package includes the data from the breast tumor that we analyzed in the corresponding publication.\\ 
- An overview of the methodology and the above published results on a breast cancer tumor.\\ ​\\ +\\ 
 +Slides[{{:​wiki:​public:​clomial.pptx|ppt}} ] An overview of the methodology and the above published results on a breast cancer tumor.\\ 
 + 
 ===== Supplementary data ===== ===== Supplementary data =====
 [[http://​noble.gs.washington.edu/​proj/​clomial/​|FASTQ]] files from exome sequencing. [[http://​noble.gs.washington.edu/​proj/​clomial/​|FASTQ]] files from exome sequencing.