Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revisionPrevious revision
Next revision
Previous revision
Next revisionBoth sides next revision
how_to [2019/10/18 20:57] – [Access a Bioconductor package source code?] adminhow_to [2020/01/02 18:21] – [Install Salmon on OSX?] admin
Line 193: Line 193:
 ---- ----
  
-**Write a scientific paper?** \\+=====   Write a scientific paper?   ===== 
 + 
 +=====   ===== 
 Put the figures together and then [[http://www.scidev.net/global/publishing/practical-guide/how-do-i-write-a-scientific-paper-.html|draft]] different [[https://www.nature.com/articles/nmeth.4532?WT.ec_id=NMETH-201712&spMailingID=55474826&spUserID=MTIyMzczNjc4MDI2S0&spJobID=1285409878&spReportId=MTI4NTQwOTg3OAS2|sections]]. Focus the [[http://www.grantcentral.com/strategies-for-avoiding-common-problems-with-research-manuscripts/|Discussion]]. Be careful about [[http://colah.github.io/posts/2019-05-Collaboration/index.html|authorship]]. Put the figures together and then [[http://www.scidev.net/global/publishing/practical-guide/how-do-i-write-a-scientific-paper-.html|draft]] different [[https://www.nature.com/articles/nmeth.4532?WT.ec_id=NMETH-201712&spMailingID=55474826&spUserID=MTIyMzczNjc4MDI2S0&spJobID=1285409878&spReportId=MTI4NTQwOTg3OAS2|sections]]. Focus the [[http://www.grantcentral.com/strategies-for-avoiding-common-problems-with-research-manuscripts/|Discussion]]. Be careful about [[http://colah.github.io/posts/2019-05-Collaboration/index.html|authorship]].
  
Line 211: Line 214:
  
 ---- ----
 +
  
 ==== Get older versions using git? ==== ==== Get older versions using git? ====
Line 242: Line 246:
 mkdir ~/proj; cd ~/proj mkdir ~/proj; cd ~/proj
 git clone git@git.bioconductor.org:packages/Pigengene git clone git@git.bioconductor.org:packages/Pigengene
 +</code>
 +
 +Now, you can build the package fom the source using:
 +
 +<code>
 +R CMD REMOVE Pigengene; R CMD build Pigengene
 +</code>
 +
 +If the build is successful, a tarbal will be created. You can install the new package using:
 +
 +<code>
 + R CMD INSTALL Pigengene_<Version>.tar.gz
 </code> </code>