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how_to [2020/02/10 19:46]
admin [Disable scroll acceleration in macOS?]
how_to [2020/02/20 01:16] (current)
shiva [Work with screen session?]
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 ---- ----
 +
 +==== Work with screen session? ====
 +
 +There are five main [[http://​www.pixelbeat.org/​lkdb/​screen.html|commands]] while working with screen session:
 +
 +  - Start and name a screen:
 +
 +<​code>​
 +screen -S $NAME
 +</​code>​
 +
 +2. Detach from a screen:
 +
 +<​code>​
 +Ctrl+a d
 +</​code>​
 +
 +3. See the list of active screens:
 +
 +<​code>​
 +screen -ls
 +</​code>​
 +
 +4. Reattach to a screen:
 +
 +<​code>​
 +screen -r $NAME
 +</​code>​
 +
 +5. Quit and kill your screen:
 +
 +<​code>​
 +Ctrl+a then Ctrl+\
 +</​code>​
 +
 +----
 +
  
 ==== Read and write excel files in R ==== ==== Read and write excel files in R ====
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-**Get access to the papers through the library when you are off-campus?** \\ +==== Get access to the papers through the library when you are off-campus? ​==== 
-First add the following to your browser (Chrome or Firefox) bookmarks.+ 
 +In any of these two ways:\\ 
 +a) First add the following to your browser (Chrome or Firefox) bookmarks.
  
 <​code>​ <​code>​
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 Then, on the journal page, click on the bookmark. Login and start reading. Then, on the journal page, click on the bookmark. Login and start reading.
 +
 +b) Use [[https://​infosec.uthscsa.edu/​two-factor-enrollment|GlobalProtect]],​ which is the University VPN.
  
 ---- ----
  
-**Convert pdf to MS word?** \\+ 
 +==== Convert pdf to MS word? ==== 
 Try whatever you can to avoid conversion! Instead, educate your team and your collaborators to use [[https://​www.authorea.com/​users/​54336|Authorea]],​ [[https://​www.overleaf.com/​|Overleaf]] or at least Google Doc. In Google Doc, references can be easily handled using [[https://​gsuite.google.com/​marketplace/​app/​paperpile/​894076725911|Paperpile]],​ and figures can be automatically numbered using the the [[https://​gsuite.google.com/​marketplace/​app/​cross_reference/​269114033347?​pann=cwsdp&​hl=en|Cross Reference]] add-on as suggested in these [[https://​lcolladotor.github.io/​2019/​04/​02/​how-to-write-academic-documents-with-googledocs/#​.Xjne6RNKjUI|guidelines]] on how to write academic documents with Google Docs . __Only__ if your biologist collaborators cannot [[http://​www.dedoimedo.com/​computers/​latex.html|unfortunately]] edit the LaTeX source, consider using a conversion tool such as docs.[[https://​docs.zone/​|zone]]. Alternatively,​ Acrobat Pro can export a .pdf as a .doc file. If Bibtex is not an option, use [[http://​www.easybib.com/​|EasyBib]]. Try whatever you can to avoid conversion! Instead, educate your team and your collaborators to use [[https://​www.authorea.com/​users/​54336|Authorea]],​ [[https://​www.overleaf.com/​|Overleaf]] or at least Google Doc. In Google Doc, references can be easily handled using [[https://​gsuite.google.com/​marketplace/​app/​paperpile/​894076725911|Paperpile]],​ and figures can be automatically numbered using the the [[https://​gsuite.google.com/​marketplace/​app/​cross_reference/​269114033347?​pann=cwsdp&​hl=en|Cross Reference]] add-on as suggested in these [[https://​lcolladotor.github.io/​2019/​04/​02/​how-to-write-academic-documents-with-googledocs/#​.Xjne6RNKjUI|guidelines]] on how to write academic documents with Google Docs . __Only__ if your biologist collaborators cannot [[http://​www.dedoimedo.com/​computers/​latex.html|unfortunately]] edit the LaTeX source, consider using a conversion tool such as docs.[[https://​docs.zone/​|zone]]. Alternatively,​ Acrobat Pro can export a .pdf as a .doc file. If Bibtex is not an option, use [[http://​www.easybib.com/​|EasyBib]].
  
 ---- ----
  
-**Enable spell check in Emacs on OS X?** \\+ 
 +==== Enable spell check in Emacs on OS X? ==== 
 The default Aquamacs spell checker has some issues. To replace it, first [[http://​stackoverflow.com/​questions/​19022015/​emacs-on-mac-os-x-how-to-get-spell-check-to-work|install]] Aspell, which is a [[https://​en.wikipedia.org/​wiki/​GNU_Aspell|replacement]] for Ispell: The default Aquamacs spell checker has some issues. To replace it, first [[http://​stackoverflow.com/​questions/​19022015/​emacs-on-mac-os-x-how-to-get-spell-check-to-work|install]] Aspell, which is a [[https://​en.wikipedia.org/​wiki/​GNU_Aspell|replacement]] for Ispell:
  
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-**Do microaray analysis or anything else in Bioconductor?​** \\+==== Do microaray analysis or anything else in Bioconductor? ​==== 
 [[http://​manuals.bioinformatics.ucr.edu/​home/​R_BioCondManual#​TOC-Affy|This ]] is an excellent site with many well commented code examples and a lot of handy short-cuts. See also [[:​how_to|Functional analysis tools]]. [[http://​manuals.bioinformatics.ucr.edu/​home/​R_BioCondManual#​TOC-Affy|This ]] is an excellent site with many well commented code examples and a lot of handy short-cuts. See also [[:​how_to|Functional analysis tools]].