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r_test [2020/03/27 16:46] – [Question 2:] adminr_test [2021/05/16 15:14] – [Question 1] admin
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 ==== Question 1 ==== ==== Question 1 ====
 +
 +Weite a recursive function that computes n!.
 +
 +----
 +
 +==== Question 2 ====
  
   - Install [[https://bioconductor.org/packages/release/bioc/html/limma.html|limma]] package from Bioconductor.   - Install [[https://bioconductor.org/packages/release/bioc/html/limma.html|limma]] package from Bioconductor.
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-==== Question 2: ====+==== Question 3: ====
  
 **A)** Using the [[https://bioconductor.org/packages/release/bioc/vignettes/maftools/inst/doc/maftools.html|maftools]] and [[http://bioconductor.org/packages/release/bioc/html/TCGAbiolinks.html|TCGAbiolinks]] packages, determine the 3 most frequently mutated genes in liver cancer. Which of these 3 mutations is more predictive of survival? To answer this question, write a function that takes as input a gene name, and save KM plots in png format. Add the p-value as a legend in the plot. Deliverables are similar to question 1. **A)** Using the [[https://bioconductor.org/packages/release/bioc/vignettes/maftools/inst/doc/maftools.html|maftools]] and [[http://bioconductor.org/packages/release/bioc/html/TCGAbiolinks.html|TCGAbiolinks]] packages, determine the 3 most frequently mutated genes in liver cancer. Which of these 3 mutations is more predictive of survival? To answer this question, write a function that takes as input a gene name, and save KM plots in png format. Add the p-value as a legend in the plot. Deliverables are similar to question 1.