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| useful_tools_for_functional_and_pathway_analysis [2021/11/19 15:48] – [Useful tools for functional and pathway analysis] admin | useful_tools_for_functional_and_pathway_analysis [2024/03/28 14:15] – [Useful tools for functional and pathway analysis] admin |
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| ===== Useful tools for functional and pathway analysis ===== | ===== Useful tools for functional and pathway analysis and target identification ===== |
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| | * [[https://agora.adknowledgeportal.org/|Agora]] hosts evidence for association of genes with Alzheimer's disease (AD) and includes over 600 potential drug [[https://agora.adknowledgeportal.org/genes/nominated-targets|targets]] for AD. |
| | * Functional genomics repository ([[https://tf.lisanwanglab.org/FILER/|FILER]]) and Alzheimer’s Disease Variants Portal ([[https://advp.niagads.org/|ADVP]]) are functional genomics database with harmonized, extensible, indexed, searchable human functional genomics data collected from 20 data sources and 80 cohorts, respectively. |
| * [[http://www.humanmine.org/%20|Humanmine ]] : given a list of genes as input (Entrez/Ensembl/Symbol or a mix), it returns interaction networks, pathways, Gene Ontology categories, relevant literature, protein domains, chromosome distributions and much more on a single page. There are also nice summaries that pop-up by hovering the mouse over a gene name. | * [[http://www.humanmine.org/%20|Humanmine ]] : given a list of genes as input (Entrez/Ensembl/Symbol or a mix), it returns interaction networks, pathways, Gene Ontology categories, relevant literature, protein domains, chromosome distributions and much more on a single page. There are also nice summaries that pop-up by hovering the mouse over a gene name. |
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